ULTIMOVACS ASDownload PDFPatent Trials and Appeals BoardMar 25, 20212020004394 (P.T.A.B. Mar. 25, 2021) Copy Citation UNITED STATES PATENT AND TRADEMARK OFFICE UNITED STATES DEPARTMENT OF COMMERCE United States Patent and Trademark Office Address: COMMISSIONER FOR PATENTS P.O. Box 1450 Alexandria, Virginia 22313-1450 www.uspto.gov APPLICATION NO. FILING DATE FIRST NAMED INVENTOR ATTORNEY DOCKET NO. CONFIRMATION NO. 15/498,728 04/27/2017 Gustav Gaudernack 0332.0001US2/ PN791356USA 5677 107992 7590 03/25/2021 HoustonHogle LLP 1666 Massachusetts Avenue Suite 12 Lexington, MA 02420 EXAMINER MCCOLLUM, ANDREA K ART UNIT PAPER NUMBER 1646 NOTIFICATION DATE DELIVERY MODE 03/25/2021 ELECTRONIC Please find below and/or attached an Office communication concerning this application or proceeding. The time period for reply, if any, is set in the attached communication. Notice of the Office communication was sent electronically on above-indicated "Notification Date" to the following e-mail address(es): docketing@houstonllp.com grant.houston@houstonllp.com PTOL-90A (Rev. 04/07) UNITED STATES PATENT AND TRADEMARK OFFICE ____________ BEFORE THE PATENT TRIAL AND APPEAL BOARD ____________ Ex parte GUSTAV GAUDERNACK, ANNE-MARIE RASMUSSEN, and ELSE MARIT INDERBERG SUSO ____________ Appeal 2020-004394 Application 15/498,728 Technology Center 1600 ____________ Before DONALD E. ADAMS, RACHEL H. TOWNSEND, and MICHAEL A. VALEK, Administrative Patent Judges. ADAMS, Administrative Patent Judge. DECISION ON APPEAL Pursuant to 35 U.S.C. § 134(a), Appellant1 appeals from Examiner’s decision to reject claims 1, 3–16, and 18–34 (Appeal Br. 1). We have jurisdiction under 35 U.S.C. § 6(b). We AFFIRM. 1 We use the word “Appellant” to refer to “applicant” as defined in 37 C.F.R. § 1.42. Appellant identifies the real party in interest as “ULTIMOVACS AS” (Appellant’s December 2, 2019, Appeal Brief (Appeal Br.) 1). Appeal 2020-004394 Application 15/498,728 2 STATEMENT OF THE CASE Appellant’s disclosure relates, inter alia, to methods of eliciting an immune response in a patient with cancer or in an individual prior to any symptoms of cancer comprising the administration of a polypeptide or cocktail of polypeptides to the patient or individual (see generally Spec.2 ¶¶ 4, 69, and 127). Appellant’s claims 1, 3, 4, and 16 are reproduced below: 1. A method of eliciting an immune response in a patient with cancer or in an individual prior to any symptoms of cancer, comprising administering to the patient or the individual at least one selected from the group consisting of: a) a polypeptide comprising a sequence selected from the group consisting of: i) SEQ ID NOS: 1, 2, 3, 7 or 8; and ii) the sequence of an immunogenic fragment of i) comprising at least eight amino acids, wherein the immunogenic fragment is not one of SEQ ID NOS: 6, or 11 to 16, or 56, wherein the polypeptide is less than or equal to 50 amino acids in length and wherein the polypeptide does not comprise the sequence of SEQ ID NO: 10 and does not consist of the sequence of SEQ ID NO: 56; b) a polypeptide consisting of a sequence of SEQ ID NO: 4; and c) a pharmaceutical composition comprising the polypeptide of part a) or b) and a pharmaceutically acceptable adjuvant, diluent or excipient. (Appeal Br. 31.) 2 Gaudernack et al., US 2017/0232087 A1, published Aug. 17, 2017. Appeal 2020-004394 Application 15/498,728 3 3. The method according to claim 1, part a), subpart ii), wherein the sequence of the immunogenic fragment of SEQ ID NO: 1, comprises at least 20 amino acids. (Id.) 4. The method according to claim 1, wherein the immunogenic fragment has the sequence of any one of SEQ ID NOS: 17 to 40. (Id.) 16. A method of eliciting an immune response in a patient with cancer or in an individual prior to any symptoms of cancer, comprising administering to the patient or the individual at least one selected from the group consisting of: a) a cocktail of polypeptides comprising at least first and second different polypeptides wherein the first polypeptide comprises a sequence selected from the group consisting of: i) SEQ ID NO: l; and ii) the sequence of an immunogenic fragment of i) comprising at least eight amino acids; and wherein the second polypeptide comprises a sequence selected from the group consisting of: iii) SEQ ID NOS: 2 to 10; and iv) the sequence of an immunogenic fragment of iii) comprising at least eight amino acids; wherein each polypeptide is less than or equal to 50 amino acids in length; and b) a pharmaceutical composition comprising the cocktail of polypeptides of part a) and a pharmaceutically acceptable adjuvant, diluent or excipient. (Id. at 33.) Appeal 2020-004394 Application 15/498,728 4 Grounds of rejection before this Panel for review: Claims 1, 3–16, and 18–34 stand rejected under the enablement provision of 35 U.S.C. § 112(a). Claims 1, 3, 4, 6–11, 16, 19–25, and 27–29 stand rejected under 35 U.S.C. § 102(e) as anticipated by Brix.3 Claims 1, 6–8, 10, and 28 stand rejected under 35 U.S.C. § 102(e) as anticipated by Chen.4 Claims 1, 6–8, 10, and 11 stand rejected under 35 U.S.C. § 103 as unpatentable over Chen. Enablement: ISSUE Does the evidence of record support Examiner’s conclusion that undue experimentation would be required to practice the full scope of Appellant’s claimed invention? ANALYSIS Examiner finds that Appellant’s claimed “method requires administration of a polypeptide comprising SEQ ID NO:1-4, 7, or 8, wherein the polypeptide is less than 50 amino acids in length” and fragments, thereof, that are at least eight amino acids in length, which are “able to elicit an immune response upon administration” (Ans. 4). Thus, Examiner finds that Appellant’s claims recite 6 separate polypeptides, with over 50 different possible immunogenic fragments containing exactly 8 amino acids, and even more when examining additional possible lengths of fragments (i.e., 9, 10, 3 Brix et al., WO 2010/037395 A2, published Apr. 8, 2010. 4 Chen et al., US 2003/0143228 A1, published July 31, 2003. Appeal 2020-004394 Application 15/498,728 5 11, amino acids) (id.). Specifically, Examiner explains, that “[i]f one immunogenic peptide fragment of 8 amino acids was selected, the additional sequence that is attached at the N- and/or C-terminals could be up to 42 amino acids” in length (id.; see also Appeal Br. 14 (Appellant does “not disagree that the claims encompass this subject matter”); Ans. 15 (Examiner finds that Appellant “agrees that the claims encompass administration of any 8 or more amino acid fragment of the enumerated sequences, surrounded by up to 42 additional amino acids to make final sequences totaling 9 to 50 amino acids in length”)). Examiner finds that although Appellant’s Specification “discloses SEQ ID NO:1-9, as well as 17-40 which are fragments of SEQ ID NO:1, as being capable of the required functions” (Ans. 4; see also id. at 14–15 (“Examiner indicated . . . that a method comprising producing an immune response with peptides of SEQ ID NO: 1-10 is enabled”)), Appellant’s Specification: [D]oes not provide pointers or direction that would lead the skilled artisan to any of the specific fragments, or fragments with additional undescribed sequence[s] that are encompassed by the instant claims, that would have the requirement function of immunogenicity. Therefore, the skilled person would be required to test all of the millions of possible peptides in order to determine which were capable of eliciting an immune response. (Id. at 6.) Examiner finds that undue experimentation would be required of a person of ordinary skill in this art to test the millions of peptides encompassed by the full scope of Appellant’s claimed invention (id.). Thus, Examiner finds that Appellant’s Specification “does not enable any person skilled in the art to which it pertains, or with which it is most nearly connected, to make and use the invention commensurate in scope with” Appeal 2020-004394 Application 15/498,728 6 Appellant’s claimed invention (Ans. 2). See In re Wright, 999 F.2d 1557, 1561 (Fed. Cir. 1993) (“[T]o be enabling, the specification of a patent must teach those skilled in the art how to make and use the full scope of the claimed invention without ‘undue experimentation.”’). Appellant contends, however, that: Polypeptides, such as those of the present invention, are presented on MHC class I or class H molecules in order to elicit a CD8+ or CD4+ T-cell immune response respectively. MHC class I/class II molecules bind to polypeptides of different lengths (e.g. MHC class I molecules bind to polypeptides that are between 8 and 10 amino acids in length whereas MHC class II molecules bind to polypeptides that are generally longer, typically between 15 and 24 amino acids in length; see [0132] of the specification as filed. There are cellular pathways by which polypeptides are processed for presentation by MHC class I and class II molecules. Therefore, even if a polypeptide of the present invention comprises certain additional amino acids at the N- and/or C-terminus, it would still be expected to induce an immune response because it could be degraded and processed into an appropriately sized fragment for presentation by MHC class I/class II molecules. In fact, as discussed at paragraph [0132], polypeptides that are longer than would normally be accommodated in either an MHC class I/class II molecule have been shown to induce particularly robust immune responses. (Appeal Br. 11 (alteration original); see also Reply Br. 7–9 (citing Roitt5).) Appellant’s Specification discloses: [D]epending upon the class of T-lymphocyte response to be elicited, different lengths of polypeptide are preferred. More specifically, in order to elicit a CD8+ T-cell response, the polypeptide must be presented on MHC class I molecules which will typically only bind polypeptides which are between 8 and 10 amino acid residues in length. On the other hand, in 5 Roitt’s Essential Immunology, 95–103 (11th ed., 2006). Appeal 2020-004394 Application 15/498,728 7 order to elicit a CD4+ T-cell response, it is necessary for the polypeptide to be presented on an MHC class II molecule for which the polypeptides may generally be longer, typically between 15 and 24 amino acid residues in length. It is to be noted that some of the polypeptides of the present invention (e.g. the polypeptide of SEQ. ID NO. 1) are longer than would normally be accommodated in either an MHC class I or class II molecule. Peptides of this length have been shown to induce more robust immune responses, e.g by groups working on HPV and cervical cancer vaccination. . . . Without wishing to be bound by theory, it is believed that such polypeptides, following their administration to a patient, are endocytosed by cells, subjected to proteolytic degradation in the proteasome and then presented on an MHC class I or class II molecule. Thus such polypeptides may give rise to an MHC class I and/or an MHC class II restricted T-cell response. It is also to be appreciated that longer polypeptides remain extant within a patient for a greater period of time than shorter polypeptides and therefore there is a longer period of time during which they may elicit an immune response. This is particularly significant as regards those polypeptides which have a relatively low MHC binding affinity. (Spec. ¶ 132.) Thus, Appellant contends that “[a]dditional amino acids attached to the immunogenic peptides, insofar as is currently claimed, do not harm and may even improve the immunogenicity of those peptides” (Appeal Br. 13; see also id. at 14 (Appellant contends that “the unspecified amino acids do not eliminate, and may in fact improve, the immunogenicity of a peptide comprising the immunogenic sequence or fragments specified”); id. at 16 (Appellant contends that “[b]y obtaining positive results for key sequences, one skilled in the art would reasonably believe that similar sequences can be expected to have the same immunogenic effect”)). We are not persuaded. Appeal 2020-004394 Application 15/498,728 8 Examiner finds “no evidence [on this record to support a finding] that processing of every one of the encompassed longer peptides would result in the specific fragments that [Appellant] believes will produce an immune response” (Ans. 19). As Examiner explains: Even if a peptide can, theoretically, bind to an MHC-receptor, that does not in any way demonstrate that the antigen from which the peptide is obtained is, in fact, processed in such a way as to give rise to the peptide in vivo. For example, the peptide may have a proteolytic cleavage site within it meaning that the peptide is not presented in vivo. Applicant relies on the fact that the peptides merely “could be degraded and processed into appropriately sized fragment for presentation by MHC class I/class II,” (emphasis added by the Examiner) without any actual evidence that this occurs, or showing the predictability of processing without the use of a computer algorithm, which Applicant indicates is unreliable. However, identification of one fragment peptide of SEQ ID NO:1 that is immunogenic (i.e. SEQ ID NO:2) does not prove that processing of all of the millions of encompassed sequences (which are largely untested) would be predictable, or that the processed antigens would necessarily induce an immune response in vivo. (Id. at 19–20 (quoting Appeal Br. 11).) In short, Examiner finds that “[i]t is not reasonable to assume that just because a long peptide contains a fragment of the claimed sequences, that processing for antigen presentation would result in an immunogenic peptide consisting of that fragment” (Ans. 20). We agree. In addition, we are not persuaded by Appellant’s reliance on prior art results obtained from HPV and cervical cancer vaccination work (see generally Appeal Br. 11 (citing Spec. ¶ 132)). At best, Appellant’s disclosure, and Appellant’s reliance thereon, suggests that this prior work provides an interesting area for experimentation to identify polypeptides that “may” be useful in eliciting an immune response (see Spec. ¶ 132). This, Appeal 2020-004394 Application 15/498,728 9 however, is not sufficient to support the enablement requirement of 35 U.S.C. § 112(a). Patent protection is granted in return for an enabling disclosure of an invention, not for vague intimations of general ideas that may or may not be workable. See Brenner v. Manson, 383 U.S. 519, 536 . . . (1966) (stating, in context of the utility requirement, that “a patent is not a hunting license. It is not a reward for the search, but compensation for its successful conclusion.”). Tossing out the mere germ of an idea does not constitute enabling disclosure. While every aspect of a generic claim certainly need not have been carried out by an inventor, or exemplified in the specification, reasonable detail must be provided in order to enable members of the public to understand and carry out the invention. Genentech Inc. v. Novo Nordisk A/S, 108 F.3d 1361, 1366 (Fed. Cir. 1997). To be complete, we recognize Examiner’s finding that (a) “a method comprising producing an immune response with peptides of SEQ ID NO:1- 10 is enabled” (see Ans. 14–15; cf. Appeal Br. 6–8 (citing Inderberg-Suso6); Appeal Br. 11–13 (citing Spec. ¶ 170)); (b) “there is agreement that the post- filed experimental data demonstrates the efficiency of the peptides from Tables 4, 6, and 7 of [Gaudernack ’8147] to generate an immune response, even in the absence of [a] checkpoint inhibitor” and, thus, Appellant’s “arguments regarding the enablement of a method comprising administration of these peptide sequences are moot” (Ans. 15; cf. Appeal Br. 8–11 and 15– 16); and (c) “[t]here is no dispute over the term ‘clinical non-responder,’ 6 Inderberg-Suso et al., Widespread CD4+ T-cell reactivity to novel hTERT epitopes following vaccination of cancer patients with a single hTERT peptide GV1001, 1 OncoImmunology 1–17 (2012) (Exhibit A of Appellant’s Brief). 7 Gaudernack et al., WO 2017/207814 A1, published Dec. 7, 2017 (Exhibit B of Appellant’s Brief). Appeal 2020-004394 Application 15/498,728 10 therefore the argument is moot” (Ans. 20; cf. Appeal Br. 14–15). The issue for the enablement rejection, however, is whether one of skill could practice the full scope of peptides recited in the claim, which as explained above far exceeds the peptides of SEQ ID NO:1–10. In addition, we note that “Attorney’s argument in a brief cannot take the place of evidence.” In re Pearson, 494 F.2d 1399, 1405 (CCPA 1974). Therefore, we are not persuaded by Appellant’s unsupported contention that: The theoretical mechanisms suggested by the Examiner could mean in theory that a very small subset of sequences may not have an immunogenic effect. However, the claims clearly recite a “method of eliciting an immune response”. If a selected peptide fragment that falls within the claim definition so happens to be incapable of producing an immune response for an unforeseen reason, then it would not fall within the overall claim scope since it would not be “eliciting an immune response”. (Appeal Br. 17.) While it may be that non-operative peptide fragments are excluded from the claim, the problem for Appellant is that the record does not show that a skilled artisan would be able to distinguish those fragments capable of eliciting an immune response from those that are not without undertaking undue experimentation. Nor is there an evidentiary basis on this record to support a finding that the set of sequences encompassed by the breadth of Appellant’s claimed invention is so small that undue experimentation would not be required to practice Appellant’s claimed invention. See PPG Indus., Inc. v. Guardian Indus. Corp., 75 F.3d 1558, 1564 (Fed. Cir. 1996) (“[T]he question of undue experimentation is a matter of degree. The fact that some experimentation is necessary does not preclude enablement; what is required is that the amount of experimentation Appeal 2020-004394 Application 15/498,728 11 ‘must not be unduly extensive.’” (quoting Atlas Powder Co. v. E.I. DuPont De Nemours & Co., 750 F.2d 1569, 1576 (Fed. Cir. 1984))). CONCLUSION The evidence of record supports Examiner’s conclusion that undue experimentation would be required to practice the claimed invention. The rejection of claim 1 under the enablement provision of 35 U.S.C. § 112(a) is affirmed. Claims 3–16 and 18–34 are not separately argued and fall with claim 1. Anticipation: ISSUE Does the preponderance of evidence on this record support Examiner’s finding that Brix or Chen teaches Appellant’s claimed invention? FACTUAL FINDINGS (FF) FF 1. Brix “relates to MHC-peptide complexes and uses thereof in the treatment of a disease in an individual” (Brix. 1:20–21; see also id. at 7:4–6 (Brix discloses that it’s “MHC multimers . . . can be used in . . . vaccine and therapy related to [cancer]”); id. at 24:11–12 (Brix discloses “an antigenic peptide not bound to a MHC molecule or an antigenic polypeptide featuring one or more antigenic peptides”); see Ans. 8). FF 2. Brix “also relates to a composition for cancer vaccination . . . a method of making the composition for cancer vaccination . . . [and] a method for cancer vaccination comprising administration to an individual in need thereof an effective amount of a cancer vaccine composition” (Brix 7:26–31; see Ans. 8). Appeal 2020-004394 Application 15/498,728 12 FF 3. Brix’s antigenic peptide . . . can be selected from the group consisting of sequences disclosed in the sequence listing starting with SEQ ID NO 1 and ending with SEQ ID NO 146508. An isolated antigenic peptide can according to the invention be selected from the group consisting of sequences identified by SEQ ID NO 1-105978 and SEQ ID NO 107384-109570 and SEQ ID NO 116661-146508. (Brix 24:26–31; Ans. 8 (citing Brix 269) (Examiner finds that Brix discloses a sequence “SVLNYERARRPGLLG” in SEQ ID NO: 44230 that is identical to Appellant’s SEQ ID NO: 2); Ans. 8 (citing Ans. 9: Sequence Alignment) (Examiner finds that Brix discloses a sequence “VLGLDDIHR” in SEQ ID NO: 137479 that is identical to Appellant’s SEQ ID NO: 27, which is a nine amino acid fragment of Appellant’s SEQ ID NO: 1); see also Spec. 11–12:Table 3; Spec 13:Table 4.) FF 4. Examiner finds that Brix’s “antigenic peptides can comprise 8-30 amino acids” (Ans. 8 (citing Brix 24:22–23)). FF 5. Examiner finds that Brix’s “MHC-multimer complex includes conjugation to an additional protein (MHC), which would be an immunogenic carrier” (Ans. 8 (citing Brix 754:14–34); see also Ans. 8 (citing Brix 821 and 832) (Examiner finds that Brix’s “antigenic peptides can be formulated in a pharmaceutical composition containing acceptable carriers, diluents, adjuvants or other additives” and “that the composition can be a pharmaceutical composition”)). FF 6. Examiner finds that Brix discloses that its disclosed peptide antigen vaccine results in an immune response “that includes peptide-specific T-cell precursors, peripheral blood lymphocytes and antibodies that bind the peptides” (Ans. 8 (citing Brix 837–838)). Appeal 2020-004394 Application 15/498,728 13 FF 7. Chen “relates to the identification of hTRT restricted epitopes and the use of these identified epitopes to elicit an immune response against the epitope” and “[m]ore particularly, the present invention uses the identified epitopes to treat hyperproliferative diseases” (Chen ¶ 4; Ans. 11 (citing Chen ¶¶ 4 and 227) (Examiner finds that Chen’s “hyperproliferative disorder can be breast or pancreatic cancer”)). FF 8. Chen discloses that a pharmaceutical composition comprising its peptides “can be administered to [a] subject” in need thereof (Chen ¶ 9; see Ans. 11 (citing Chen ¶¶ 9 and 241–242)). FF 9. Examiner finds that Chen discloses “SEQ ID NO:52 (WRTFVLRVRAQDPPP),” which “comprises a 14 amino acid fragment of [Appellant’s] SEQ ID NO:7” (Ans. 11 (citing Chen ¶¶ 77–79)). FF 10. Examiner finds that Chen discloses that its peptide “can be conjugated to one or more other agents, including polypeptides such as KLH or BSA” adjuvants (Ans. 11 (citing Chen ¶ 99)). FF 11. Examiner finds that Chen “describes measurement of specific T-cell responses to administration of hTERT peptides” (Ans. 11 (citing Chen ¶¶ 357–366 (Examples 30–32))). ANALYSIS The rejection over Brix: Examiner finds that Brix teaches Appellant’s claimed invention (see Ans. 7–9; FF 1–10). Claim 1: Appellant’s claim 1 is reproduced above. Appeal 2020-004394 Application 15/498,728 14 Appellant contends that Brix “does not demonstrate that even one species of [its disclosed] . . . peptides is antigenic, immunogenic or activates T-cells” (Appeal Br. 18). Appellant, therefore, contends that “it would take an excessive amount of experimentation in order to identify any peptide in Brix . . . that would elicit an immune response” (id. (citing Gaudernack Decl.8)). Gaudernack declares that Brix does not provide “experimental data . . . for the majority of [its disclosed] sequences” and “constructing a cancer vaccine of randomly selected peptides with no information linking the peptides to the HLA molecules that are capable of presenting the epitope, will not result in a useful vaccine” (Gaudernack Decl. ¶¶ 5–6; see also Appeal Br. 19). Gaudernack further declares that the “NetMHC algorithm software . . . [Brix] used to predict [its] antigenic peptide epitopes . . . were (and still are) far from perfect and of limited use in predicting binding of longer peptides, i.e. HLA class-II epitopes” and Brix “provides no guidance in identifying the potentially relevant peptides hiding within their list of peptides,” thus “the only option to identify relevant peptides for use in MHC multimers or for cancer vaccines is in vitro experimentation,” which “require huge laboratory resources,” therefore, “it is not practicable to test all of the peptides listed in Brix . . . in order to identify the relevant peptides, for example, for use in MHC multimers or cancer vaccines” (Gaudernack Decl. ¶¶ 8–11; see also Appeal Br. 19–23; Reply Br. 2–7). Thus, Appellant contends that “based on the disclosure of Brix . . ., without extensive and undue experimentation, the public was not in possession of the claimed 8 Declaration of Gustav Gaudernack, signed Nov. 8, 2018 (Exhibit D of Appellant’s Appeal Brief). Appeal 2020-004394 Application 15/498,728 15 invention at the time of filing and Brix . . . does not anticipate the claimed invention” (Appeal Br. 19). We are not persuaded. “[A]nticipation does not require actual performance of suggestions in a disclosure. . . .” Bristol–Myers Squibb Co. v. Ben Venue Labs., Inc., 246 F.3d 1368, 1379 (Fed. Cir. 2001) (citing In re Donohue, 766 F.2d 531, 533 (Fed. Cir. 1985) (“It is not, however, necessary that an invention disclosed in a publication shall have actually been made in order to satisfy the enablement requirement.”)). “Whether a prior art reference is enabling is a question of law based upon underlying factual findings.” SmithKline Beecham [Corp. v. Apotex Corp.], 403 F.3d [1331,] 1342–43 [(Fed. Cir. 2005)] (citation omitted). Novo Nordisk Pharmaceuticals, Inc. v. Bio-Technology General Corp., 424 F.3d 1347, 1355 (Fed. Cir. 2005). Therefore, we are not persuaded by Appellant’s contention, and Gaudernack’s statements, relating to Brix’s lack of experimental data (see, e.g., Appeal Br. 18–19; Gaudernack Decl. ¶¶ 5– 6). The method of eliciting an immune response in a patient with cancer, set forth in Appellant’s claim 1, comprises administering to the patient a polypeptide comprising a sequence having SEQ ID NO: 2 (see Appeal Br. 31). On this record, Examiner found that Brix discloses an antigenic peptide that is identical to Appellant’s SEQ ID NO: 2 for use in a vaccine that is administered to an individual in need thereof to elicit an immune response (see FF 1–6; see also Ans. 23 (Examiner finds that “[t]he disclosure of Brix is more than an idea, plan, or invitation for experimentation. The reference discloses specific, enumerated peptides that have been predicted . . . to be antigenic” and “directs the reader to administer Appeal 2020-004394 Application 15/498,728 16 these peptides in a suitable formulation to induce an immune response in a cancer patient”); Ans. 24 (Examiner finds that “Brix has described specific amino acid sequences, and has given specific steps to perform to achieve the goal of immunogenic response”)). In sum, Brix discloses a method of eliciting an immune response in a patient with cancer, comprising administering to the patient a polypeptide comprising a sequence having SEQ ID NO: 2 and, thus, teaches the method of Appellant’s claim 1 (see FF 1–6; Ans. 23–24; cf. Appeal Br. 31). We find no limitation in Appellant’s claim 1 that requires a specific type of immune response (see Appeal Br. 31). Therefore, we are not persuaded by Gaudernack’s statement that Brix’s algorithm is “far from perfect and of limited use in predicting binding of longer peptides, i.e. HLA class-II epitopes” (Gaudernack Decl. ¶ 8). For the same reason, we are not persuaded by Appellant’s contention that Brix fails to establish that its peptides “activate[] T-cells” (see Appeal Br. 18). Simply stated, Appellant failed to establish a persuasive evidentiary basis on this record to support a finding that Brix’s method would not result in an immune response within the scope of Appellant’s claim 1. For the foregoing reasons, we are not persuaded by Appellant’s contentions, and Gaudernack’s statements, that undue experimentation would have been required to practice Brix’s method of eliciting an immune response in a patient with cancer, comprising administering to the patient a polypeptide comprising a sequence having SEQ ID NO: 2 (see Appeal Br. 19–23; Gaudernack Decl. ¶¶ 5–11). Appeal 2020-004394 Application 15/498,728 17 For the foregoing reasons, we are not persuaded by Appellant’s characterization of Brix’s disclosure as “[t]he mere tossing out of an idea, or merely naming a peptide” (see Appeal Br. 18; see also id. at 23). To be complete, we recognize, but are not persuaded by Appellant’s contentions regarding Impax Laboratories, Inc., v. Aventis Pharmaceuticals Inc., 468 F.3d 1366 (Fed. Cir. 2006). See Reply Br. 3–6. As discussed in Wrigley, the “issue in Impax was whether the use of the drug riluzole for treating amyotrophic lateral sclerosis (‘ALS’) was anticipated . . . there are important distinctions between that case and this one. . . . the only mention of riluzole in the prior art reference in Impax was to disclaim it from the disclosed invention.” Wm. Wrigley Jr. Co. v. Cadbury Adams USA LLC, 683 F.3d 1356, 1361–62 (Fed. Cir. 2012). Thus, unlike the record in this Appeal or Wrigley, Impax disclaimed the drug from the disclosed invention and, in addition, failed to provide the requisite dosage information necessary to practice the invention claimed therein. In contrast, Wrigley supports the anticipation rejection on this record. In Wrigley, the prior art patent, Shahidi, disclosed “several categories of components that can be included in the compositions” including “WS-3 and WS-23 as two of three ‘particularly preferred cooling agents’” and “menthol as one of 23 listed flavoring agents.” Id. at 1361. Wrigley found the “question for purposes of anticipation is therefore whether the number of categories and components in Shahidi was so large that the combination of WS-23 and menthol would not be immediately apparent to one of ordinary skill in the art.” Id. Wrigley concluded that “the Shahidi reference clearly identifies the combination.” Id. at 1362. The same reasoning applies here, where Brix discloses polypeptides, including those falling within the scope Appeal 2020-004394 Application 15/498,728 18 of Appellant’s claimed invention, and teaches that the peptides will produce an immune response when administered to an individual (see FF 1–6). Therefore, we are not persuaded by Appellant’s contentions regarding Impax (Reply Br. 3–6). Claim 3: Appellant’s claim 3 is reproduced above. Appellant contends that Brix does not teach an “immunogenic fragment of SEQ ID NO. 1 [that] is at least 20 amino acids in length” (see Appeal Br. 23–24). Examiner does not dispute Appellant’s contention, therefore, the rejection of claim 3 is reversed. Claim 4: Appellant’s claim 4, reproduced above. Appellant’s claim 4 depends from and further limits Appellant’s claim 1 to require that “the immunogenic fragment has [, i.e. comprises,] the sequence of any one of SEQ ID NOS: 17 to 40” (Appeal Br. 31). Appellant contends that “[c]laim 4 recites specific peptide sequences not recited in Brix” (Appeal Br. 24). We are not persuaded. As Examiner explains, Brix discloses a sequence “VLGLDDIHR” in SEQ ID NO: 137479 that is identical to Appellant’s SEQ ID NO: 27 (FF 3). Thus, Brix teaches the method of Appellant’s claim 4 (see FF 1–6). Claim 16: Appellant’s claim 16 is reproduced above. The method of eliciting an immune response in a patient with cancer, set forth in Appellant’s claim 16, Appeal 2020-004394 Application 15/498,728 19 comprises, inter alia, administering to the patient a cocktail of polypeptides comprising at least first and second different polypeptides wherein the first polypeptide is an immunogenic fragment of SEQ ID NO: 1 comprising at least eight amino acids and wherein the second polypeptide is a sequence having SEQ ID NO: 2 (see Appeal Br. 31). Examiner finds that Brix “anticipates a combination of one or more [of its disclosed] peptide species” and expressly discloses sequences identical to Appellant’s SEQ ID NOs: 2 and 27, wherein Appellant’s SEQ ID NO: 27 is a nine amino acid fragment of Appellant’s claim 1 (FF 3). Examiner, therefore, reasons that “one possible combination of Brix would be . . . [the combination of Brix’s SEQ ID NOs: 2 and 27], which would constitute a ‘cocktail’ of polypeptides comprising two different polypeptides selected from the polypeptides encompassed by [Appellant’s] claim 16” (Ans. 24). We are not persuaded. In order to support an anticipation rejection, a prior art “reference must clearly and unequivocally disclose the claimed [invention] or direct those skilled in the art to the [invention] without any need for picking, choosing, and combining various disclosures not directly related to each other by the teachings of the cited reference.” In re Arkley, 455 F.2d 586, 587 (CCPA 1972) (emphasis added). For a finding of anticipation, “it is not enough that the prior art reference . . . includes multiple, distinct teachings that [an ordinary] artisan might somehow combine to achieve the claimed invention.” Net MoneyIN, Inc. v. VeriSign, Inc., 545 F.3d 1359, 1371 (Fed. Cir. 2008). As Appellant explains, “[c]laim 16 recites a method of eliciting an immune response comprising administering a specific cocktail of Appeal 2020-004394 Application 15/498,728 20 polypeptides” and, although, Brix “may make a general disclosure regarding a plurality of antigenic peptides . . . there is no disclosure of the specific combination of peptides as recited in . . . claim 16” (Appeal Br. 24). We agree. On this record, Examiner failed to provide an evidentiary basis to support a finding that Brix teaches the specific combination of polypeptides required by Appellant’s claim 16, without resorting to improperly picking and choosing from among the various polypeptides disclosed by Brix. Claims 8, 9, 21, and 22: Appellant’s claims 8 and 9 depend directly or indirectly from Appellant’s claim 30 (see Appeal Br. 32). Appellant’s claims 21 and 22 depend directly or indirectly from Appellant’s claim 34 (see Appeal Br. 35). Examiner did not include claims 30 and 34 in the rejection under 35 U.S.C. § 102(e) as anticipated by Brix (see Ans. 7). Because claims 8, 9, 21, and 22 depend from non-rejected claims, we reverse the rejection of claims 8, 9, 21, and 22 over Brix. The rejection over Chen: Examiner finds that Chen teaches Appellant’s claimed invention (see Ans. 10–11; FF 11–15). Claim 1: Appellant’s claim 1 is reproduced above. The method of eliciting an immune response in a patient with cancer, set forth in Appellant’s claim 1, comprises administering to the patient a polypeptide comprising a sequence Appeal 2020-004394 Application 15/498,728 21 of an immunogenic fragment of SEQ ID NO: 7 comprising at least eight amino acids, wherein the immunogenic fragment is not one of SEQ ID NOS: 6, or 11 to 16, or 56, wherein the polypeptide is less than or equal to 50 amino acids in length and wherein the polypeptide does not comprise the sequence of SEQ ID NO: 10 and does not consist of the sequence of SEQ ID NO: 56 (see Appeal Br. 31). On this record, Examiner found that Chen discloses an antigenic peptide that comprises a 14 amino acid fragment of Appellant’s SEQ ID NO: 7 for use in a vaccine that is administered to an individual in need thereof to elicit an immune response (see FF 7–11; see also Ans. 10–11). In sum, Chen discloses a method of eliciting an immune response in a patient with cancer comprising administering to the patient a polypeptide comprising a sequence of an immunogenic fragment of Appellant’s SEQ ID NO: 7 comprising at least eight amino acids, wherein the immunogenic fragment is not one of SEQ ID NOS: 6, or 11 to 16, or 56, wherein the polypeptide is less than or equal to 50 amino acids in length and wherein the polypeptide does not comprise the sequence of SEQ ID NO: 10 and does not consist of the sequence of SEQ ID NO: 56 and, thus, teaches the method of Appellant’s claim 1 (see FF 7–11; Ans. 23–24; cf. Appeal Br. 31). We find no limitation in Appellant’s claim 1 that requires a specific type of immune response (see Appeal Br. 31). Therefore, we are not persuaded by Appellant’s contention that Chen does “not disclose that SEQ ID NO: 52 can elicit a T-cell response” and is, therefore, “clearly not suitable for use in [Appellant’s] claimed methods of eliciting an immune response” (see Appeal Br. 25). Simply stated, Appellant failed to establish a persuasive evidentiary basis on this record to support a finding that Brix’s Appeal 2020-004394 Application 15/498,728 22 method would not result in an immune response within the scope of Appellant’s claim 1. For the foregoing reasons, we are not persuaded by Appellant’s contention that Chen provides “no data . . . on the immunogenicity of any of the polypeptides falling within the scope of [Appellant’s] claim 1” (id. at 26). For the same reasons, we are not persuaded by Appellant’s contention that Chen fails to provide an enabling disclosure (id.; see also Reply Br. 2– 7). See Novo Nordisk Pharmaceuticals, Inc. v. Bio-Technology General Corp., 424 F.3d at 1355 (“[A]nticipation does not require actual performance of suggestions in a disclosure.” (citations omitted)). Claim 8: Appellant’s claim 8 depends from Appellant’s claim 30 (see Appeal Br. 32). Examiner did not include claim 30 in the rejection under 35 U.S.C. § 102(b) as anticipated by Chen (see Ans. 10). Because claim 8 depends from non-rejected claim 30, we reverse the rejection of claim 8 over Chen. CONCLUSION The preponderance of evidence on this record supports Examiner’s finding that Brix teaches Appellant’s claimed invention. The rejection of claims 1 and 4 under 35 U.S.C. § 102(e) as anticipated by Brix is affirmed. Claims 6, 7, 10, 11, 25, and 28 are not separately argued and fall with claim 1. The preponderance of evidence on this record fails to support Examiner’s finding that Brix teaches Appellant’s claimed invention with respect to claims 3, 8, 9, 16, 19, 20–24, 27, and 29. The rejection of claims Appeal 2020-004394 Application 15/498,728 23 3, 8, 9, 16, 19, 20–24, 27, and 29 under 35 U.S.C. § 102(e) as anticipated by Brix is reversed. The preponderance of evidence on this record supports Examiner’s finding that Chen teaches Appellant’s claimed invention with respect to claims 1, 6, 7, 10, and 28. The rejection of claim 1 under 35 U.S.C. § 102(b) as anticipated by Chen is affirmed. Claims 6, 7, 10, and 28 are not separately argued and fall with claim 1. The preponderance of evidence on this record fails to support Examiner’s finding that Chen teaches Appellant’s claimed invention with respect to claim 8. The rejection of claim 8 under 35 U.S.C. § 102(b) as anticipated by Chen is reversed. Obviousness: ISSUE Does the preponderance of evidence relied upon by Examiner support a conclusion of obviousness? FACTUAL FINDINGS (FF) FF 12. Examiner relies on Chen as discussed above (see Ans. 12–13; see also FF 7–11). ANALYSIS Examiner concludes that, at the time Appellant’s invention was made, Chen makes obvious the subject matter of Appellant’s claimed invention (see generally Ans. 13–14). “[A]nticipation is the epitome of obviousness.” Connell v. Sears, Roebuck & Co., 722 F.2d 1542, 1548 (Fed. Cir. 1983). Therefore, having found Appellant’s claim 1 anticipated by Chen, we find no error in Examiner’s conclusion that Chen makes obvious the subject matter of Appellant’s claim 1. Appeal 2020-004394 Application 15/498,728 24 Claim 1: For the reasons discuss above, with respect to the anticipation rejection over Chen, we are not persuaded by Appellant’s contention that Chen does “not provide an enabling disclosure of [Appellant’s claimed] method” (see Appeal Br. 27). As discussed above, Chen discloses a method of eliciting an immune response in a patient with cancer comprising administering to the patient a polypeptide comprising a sequence of an immunogenic fragment of Appellant’s SEQ ID NO: 7 comprising at least eight amino acids, wherein the immunogenic fragment is not one of SEQ ID NOS: 6, or 11 to 16, or 56, wherein the polypeptide is less than or equal to 50 amino acids in length and wherein the polypeptide does not comprise the sequence of SEQ ID NO: 10 and does not consist of the sequence of SEQ ID NO: 56 and, thus, teaches the method of Appellant’s claim 1 (see FF 7–12). Because Chen teaches an immunogenic fragment of Appellant’s SEQ ID NO: 7 will produce an immune response when administered to an individual (see id.), we are not persuaded by Appellant’s contention that Chen fails to provide a reasonable expectation of success in practicing Appellant’s claimed invention (see Appeal Br. 28–29; see generally Reply Br. 7). A reference disclosure is not limited only to its preferred embodiments, but is available for all that it discloses and suggests to one of ordinary skill in the art. In re Lamberti, 545 F.2d 747, 750 (CCPA 1976); see also In re Susi, 440 F.2d 442, 446 n.3 (CCPA 1971) (Disclosed examples and preferred embodiments do not constitute a teaching away from a broader disclosure or non-preferred embodiments.). Therefore, we are not Appeal 2020-004394 Application 15/498,728 25 persuaded by Appellant’s contention that Chen teaches away from Appellant’s claimed invention because Chen did not select a peptide that is an immunogenic fragment of Appellant’s SEQ ID NO: 7, i.e., Chen’s SEQ ID NO: 52, “for further testing” (Appeal Br. 28). For the foregoing reasons, we are not persuaded by Appellant’s contention that they obtained an “unexpected technical effect” by practicing Chen’s method, wherein an “improved immune response” was elicited “in patient samples” using Chen’s SEQ ID NO: 52 compared to other immunogenic peptides disclosed by Chen (Appeal Br. 28–29). To the contrary, the “technical effect” observed by Appellant, was a direct result of practicing the method disclosed by Chen. Claim 8: Appellant’s claim 8 depends from Appellant’s claim 30 (see Appeal Br. 32). Examiner did not include claim 30 in the rejection under 35 U.S.C. § 103 as being unpatentable over Chen (see Ans. 12). Because claim 8 depends from non-rejected claim 30, we reverse the rejection of claim 8 over Chen. CONCLUSION The preponderance of evidence relied upon by Examiner supports a conclusion of obviousness. The rejection of claim 1 under 35 U.S.C. § 103 as unpatentable over Chen is affirmed. Claims 6, 7, 10, and 11 are not separately argued and fall with claim 1. The preponderance of evidence relied upon by Examiner fails to support a conclusion of obviousness, with respect to claim 8. The rejection of claim 8 under 35 U.S.C. § 103 as unpatentable over Chen is reversed. Appeal 2020-004394 Application 15/498,728 26 DECISION SUMMARY In summary: Claim(s) Rejected 35 U.S.C. § Reference(s)/Basis Affirmed Reversed 1, 3–16, 18–34 112(a) Enablement 1, 3–16, 18–34 1, 3, 4, 6–11, 16, 19–25, 27–29 102(e) Brix 1, 4, 6, 7, 10, 11, 25, 28 3, 8, 9, 16, 19, 20–24, 27, 29 1, 6–8, 10, 28 102(b) Chen 1, 6, 7, 10, 28 8 1, 6–8, 10, 11 103 Chen 1, 6, 7, 10, 11 8 Overall Outcome 1, 3–16, 18–34 TIME PERIOD FOR RESPONSE No time period for taking any subsequent action in connection with this appeal may be extended under 37 C.F.R. § 1.136(a). AFFIRMED Copy with citationCopy as parenthetical citation